32480 AAA_12
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32480 chr_2 AAA_12 2429161 2429769 + AAA_12

Synonyms

NCBI ID Ensembl Genomes exon ID
7452928 Thaps32480.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0327

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

27773

CAP_ED
0.9145

1676

hypothetical protein
0.9106

5309

Methyltransf_31
0.9065

6997

hypothetical protein
0.9036

22465

PTZ00169
0.9026

20659

hypothetical protein
0.8969

bd1839

(bd1839) NA
0.8959

bd1756

(bd1756) NA
0.8927

2622

hypothetical protein
0.8909

38011

PKc_like superfamily
0.8902

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 162.718 5.45E-50 1 - 175 superfamily 257490
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 162.718 5.45E-50 1 - 175 superfamily 257490
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 118.14 1.56E-30 1 - 199 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 164706 242790 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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