22465 PTZ00169
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22465 chr_4 PTZ00169 2093261 2094551 - PTZ00169

Synonyms

NCBI ID Ensembl Genomes exon ID
7451376 Thaps22465.4, Thaps22465.1, Thaps22465.3, Thaps22465.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9682

bd96

(bd96) eIF-3_zeta
0.9368

1676

hypothetical protein
0.936

27773

CAP_ED
0.9214

21706

S1_Rrp4
0.9193

262555

AAT_I superfamily
0.9188

2622

hypothetical protein
0.9179

19158

GRX_PICOT_like
0.9173

5309

Methyltransf_31
0.9133

267979

HCO3_cotransp superfamily
0.9129

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 79.2155 9.45E-19 245 - 321 superfamily 249634
PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional - 218.099 1.77E-68 27 - 321 multi-dom 240302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15797 PHATRDRAFT_15797 171727 189112 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 GO:0005215 GO:0005489 GO:0006118 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

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