32723 Chloroa_b-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32723 chr_3 Chloroa_b-bind 472862 473638 - Chloroa_b-bind

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps32723.1, Thaps32723.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0224
 0.27

Most Highly Correlated Transcripts

270221

hypothetical protein
0.9818

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9766

270222

0.9678

262313

Chloroa_b-bind superfamily
0.9649

bd1820

(bd1820) Fasciclin
0.9636

bd1645

(bd1645) tpt
0.9624

4718

SDR_a5
0.9621

bd218

(bd218) Chloroa_b-bind superfamily
0.9595

31983

Chloroa_b-bind superfamily
0.9569

2341

(Lhcr12) fucoxanthin chlorophyll a/c protein
0.9545

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. cl02879 99.6885 3.87E-26 88 - 221 specific 249913
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 99.6885 3.87E-26 88 - 221 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 169285 261276 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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