3331 Bac_rhamnosid superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3331 chr_3 Bac_rhamnosid superfamily 685647 689637 - Bac_rhamnosid superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441704 Thaps3331.3, Thaps3331.1, Thaps3331.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0128

Most Highly Correlated Transcripts

8384

hypothetical protein
0.9473

23130

NT_PAP_TUTase
0.9402

263483

CHD
0.9376

263051

ZntA
0.9354

3719

DECH_helic
0.925

2519

hypothetical protein
0.9188

263610

COG3899
0.9178

1268

hypothetical protein
0.9162

11613

hypothetical protein
0.9145

261357

NAD_binding_8 superfamily
0.9093

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bac_rhamnosid superfamily Bacterial alpha-L-rhamnosidase; This family consists of bacterial rhamnosidase A and B enzymes. L-... - 191.331 1.26E-51 612 - 1246 superfamily 253267
Bac_rhamnosid_N superfamily Alpha-L-rhamnosidase N-terminal domain; This family consists of bacterial rhamnosidase A and B... - 85.4257 1.20E-18 376 - 534 superfamily 254858

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 200117 319065 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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