33589 Brix superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33589	chr_4	Brix superfamily	9085	10517	+	Brix superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443854	Thaps33589.2, Thaps33589.1, Thaps33589.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0221

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0101	0.32	0.0013 0.0095

Most Highly Correlated Transcripts

bd96 (bd96) eIF-3_zeta 0.9548	bd1709 (bd1709) NA 0.9403	21725 Brix superfamily 0.9246	268003 hypothetical protein 0.9121	36186 iojap_ybeB 0.9117	31465 Brix 0.909
20658 Nop53 0.909	40341 WD40 superfamily 0.9029	40509 (RL30) Ribosomal_L24e_L24 0.9017	22498 DEXDc superfamily 0.9016

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Brix superfamily		Brix domain; Brix domain.	-	285.359	2.40E-94	63 - 348	superfamily	260706

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_21557	PHATRDRAFT_21557	202113	296219	428142	Cre02.g095400.t1.2	AT3G15460.1	312071

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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