33701 DUF4079Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33701	chr_4	DUF4079	903858	904829	-	DUF4079

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453343	Thaps33701.2, Thaps33701.3, Thaps33701.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0016

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0288	0.28	1.4 10

Most Highly Correlated Transcripts

38608 SDR_a5 0.9415	31829 CBS_like 0.9207	bd463 (bd463) Aa_trans superfamily 0.9206	bd1893 (bd1893) NA 0.9184	268592 VDE superfamily 0.9156	21348 hypothetical protein 0.9133
270213 (Hlip2) high light induced protein 2 0.9102	bd1758 (bd1758) NA 0.9098	bd1645 (bd1645) tpt 0.9063	1254 Chalcone superfamily 0.9013

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF4079 superfamily		Protein of unknown function (DUF4079); This is an uncharacterized family of proteins.	-	129.668	5.97E-37	95 - 273	superfamily	257638
DUF4079 superfamily		Protein of unknown function (DUF4079); This is an uncharacterized family of proteins.	-	129.668	5.97E-37	95 - 273	superfamily	257638

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_16334	PHATRDRAFT_16334	215339	240794	430925	Cre12.g519300.t1.2	AT3G61870.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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