33868 EHD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33868 chr_4 EHD 884460 886643 + EHD

Synonyms

NCBI ID Ensembl Genomes exon ID
7453339 Thaps33868.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0244
 0.36

Most Highly Correlated Transcripts

bd1380

(bd1380) ycf39
0.9153

bd208

(bd208) DUF3529
0.9133

39841

ArsA_ATPase
0.9124

262977

NA
0.9094

22547

hypothetical protein
0.9084

9037

hypothetical protein
0.9054

268343

NA
0.9017

31751

PKCI_related
0.9012

268062

PRK14293
0.8996

bd211

(bd211) Maf_Ham1 superfamily
0.8996

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EHD Eps15 homology domain (EHD), C-terminal domain; Dynamin-like C-terminal Eps15 homology domain (EHD... cl17170 393.948 2.59E-132 385 - 626 specific 206740
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 393.948 2.59E-132 385 - 626 superfamily 266525

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8770 PHATRDRAFT_8770 166535 256554 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003924 GO:0005525 GO:0004799 GO:0050757 -

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0004799

thymidylate synthase activity

Details: 
Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = 7,8-dihydrofolate + thymidylate.
GO Category: 
MF

GO:0050757

thymidylate synthase biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase, which catalyzes the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP.
GO Category: 
BP

Add comment

Log in to post comments