34197 Ntn_hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34197 chr_5 Ntn_hydrolase superfamily 230917 231658 - Ntn_hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448468 Thaps34197.2, Thaps34197.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0285

Most Highly Correlated Transcripts

270222

0.9184

bd1813

(bd1813) NA
0.917

bd1934

(bd1934) NA
0.9121

19158

GRX_PICOT_like
0.8868

268443

SAICAR_synt_Sc
0.8812

bd1801

(bd1801) NA
0.8742

bd738

(bd738) NA
0.8735

36476

WD40 superfamily
0.8651

bd690

(bd690) NA
0.8649

bd877

(bd877) NA
0.8625

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 111.908 9.14E-31 60 - 179 superfamily 260443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11795 PHATRDRAFT_11795 162327 262428 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004298 GO:0005839 GO:0006511 GO:0004299 -

GO:0004298

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0005839

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

GO:0004299

NA

Details: 
NA
GO Category: 
NA

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