34399 FolD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34399 chr_5 FolD 90967 92172 - FolD

Synonyms

NCBI ID Ensembl Genomes exon ID
7448446 Thaps34399.2, Thaps34399.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0206

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0169
 0.34

Most Highly Correlated Transcripts

bd624

(bd624) Glyco_transf_34 superfamily
0.9146

23931

PLN02244
0.8909

bd1765

(bd1765) NA
0.8881

bd1893

(bd1893) NA
0.8829

bd718

(bd718) PRK10387
0.8687

bd687

(bd687) NA
0.8641

bd1820

(bd1820) Fasciclin
0.8618

bd1078

(bd1078) NA
0.8575

35409

plant_peroxidase_like superfamily
0.857

6980

hypothetical protein
0.8542

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase; NADP binding domain... cl17226 252.861 4.94E-83 174 - 364 specific 133448
NAD_bind_amino_acid_DH superfamily NAD(P) binding domain of amino acid dehydrogenase-like proteins; Amino acid dehydrogenase(DH)-like... - 252.861 4.94E-83 174 - 364 superfamily 266569
THF_DHG_CYH superfamily Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/... - 151.892 8.82E-45 62 - 179 superfamily 250116
THF_DHG_CYH superfamily Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/... - 151.892 8.82E-45 62 - 179 superfamily 250116
FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme... - 370.357 2.56E-127 62 - 369 multi-dom 223268

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23623 PHATRDRAFT_23623 227901 319300 459672 Cre03.g182450.t1.2 AT3G12290.1 307593

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0009396 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0009396

folic acid-containing compound biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.
GO Category: 
BP

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