34994 (vhl1) Prefoldin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34994 chr_6 (vhl1) Prefoldin 592156 592913 - Prefoldin

Synonyms

NCBI ID Ensembl Genomes exon ID
7448583 Thaps34994.1, Thaps34994.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0227

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0069
 0.35

Most Highly Correlated Transcripts

21723

DnaJ
0.8886

29166

Peptidase_S28 superfamily
0.88

31256

TGT superfamily
0.857

261661

(RM4) Ribosomal_L4
0.8562

30691

AdoMet_MTases
0.8559

bd1221

(bd1221) recQ_fam
0.8546

38472

HA2
0.8541

38149

Acatn superfamily
0.854

21491

hypothetical protein
0.8539

260941

CDP-OH_P_transf superfamily
0.8514

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Prefoldin Prefoldin subunit; This family comprises of several prefoldin subunits. The biogenesis of the... cl09111 77.2951 3.12E-18 76 - 199 specific 251665
Prefoldin superfamily Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that... - 77.2951 3.12E-18 76 - 199 superfamily 263721

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32869 PHATRDRAFT_32869 237601 180947 454960 Cre06.g261650.t1.1 AT5G49510.2 320679

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0006457 GO:0016272 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0016272

prefoldin complex

Details: 
A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.
GO Category: 
CC

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