35085 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35085 chr_6 PKc_like superfamily 713936 715462 + PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443590 Thaps35085.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0357

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9834

bd812

(bd812) NA
0.8281

bd811

(bd811) NA
0.8098

2047

hypothetical protein
0.8071

518

PKc_like superfamily
0.7826

23810

(PPS1) PRK06464
0.7689

11437

hypothetical protein
0.7506

bd648

(bd648) NA
0.7464

bd1748

(bd1748) NA
0.7401

bd696

(bd696) AAT_I superfamily
0.7258

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 8.47E-25 174 - 277 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 8.47E-25 174 - 277 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 8.47E-25 174 - 277 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 8.47E-25 174 - 277 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 238.288 2.10E-74 318 - 499 superfamily 263920
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 68.7047 1.81E-13 33 - 141 multi-dom 223736
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 68.7047 1.81E-13 33 - 141 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005952 GO:0006468 GO:0008603 GO:0004672 GO:0004682 GO:0004691 GO:0005956 GO:0008605 -

GO:0005952

cAMP-dependent protein kinase complex

Details: 
An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.
GO Category: 
CC

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0008603

cAMP-dependent protein kinase regulator activity

Details: 
Modulation of the activity of the enzyme cAMP-dependent protein kinase.
GO Category: 
MF

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0004682

NA

Details: 
NA
GO Category: 
NA

GO:0004691

cAMP-dependent protein kinase activity

Details: 
Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of cAMP.
GO Category: 
MF

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008605

NA

Details: 
NA
GO Category: 
NA

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