518 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
518 chr_6 PKc_like superfamily 713936 715889 + PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443591 Thaps518.1, Thaps518.2, Thaps518.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0357

Most Highly Correlated Transcripts

263643

Tub superfamily
0.8509

2047

hypothetical protein
0.8328

8502

hypothetical protein
0.8235

35085

PKc_like superfamily
0.7826

5250

hypothetical protein
0.7707

23350

lectin_L-type
0.7688

6875

DUF4471 superfamily
0.7581

11864

hypothetical protein
0.7511

11743

hypothetical protein
0.7373

7208

Ras_like_GTPase superfamily
0.7222

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 1.66E-24 174 - 277 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 1.66E-24 174 - 277 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 1.66E-24 174 - 277 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 1.66E-24 174 - 277 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 376.501 1.43E-126 278 - 576 superfamily 263920
PTZ00263 protein kinase A catalytic subunit; Provisional - 328.701 2.25E-107 261 - 578 multi-dom 140289
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 69.0899 1.82E-13 33 - 141 multi-dom 223736
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 69.0899 1.82E-13 33 - 141 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre03.g199050.t1.2 Not available 314340

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004674 GO:0004713 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

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