35410 Transglut_core
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35410 chr_7 Transglut_core 959752 961554 + Transglut_core

Synonyms

NCBI ID Ensembl Genomes exon ID
7444123 Thaps35410.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0448

Most Highly Correlated Transcripts

12500

SNF2_N
0.9439

264679

Syja_N
0.9323

12602

MYSc
0.9292

21274

hypothetical protein
0.9291

261495

Peptidase_M36
0.929

269100

S_TKc
0.9285

38726

hypothetical protein
0.928

263191

PLN03076
0.9277

596

Adaptin_N
0.9275

22916

DUF1162 superfamily
0.9265

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Transglut_core Transglutaminase-like superfamily; This family includes animal transglutaminases and other... cl17362 79.0046 1.69E-17 126 - 224 specific 250908
Transglut_core superfamily Transglutaminase-like superfamily; This family includes animal transglutaminases and other... - 79.0046 1.69E-17 126 - 224 superfamily 266651

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 179365 169578 Not available Cre01.g053900.t1.1 AT5G49570.1 553393

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

Not available -

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