12602 MYSc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
12602 chr_3 MYSc 1635478 1641274 - MYSc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0169

Most Highly Correlated Transcripts

33225

MYSc
0.9494

12500

SNF2_N
0.9469

262171

CAP_ED
0.9451

262607

WD40 superfamily
0.9447

20404

hypothetical protein
0.9424

268454

CAP_ED
0.9415

5321

CobN-Mg_chel superfamily
0.9413

263191

PLN03076
0.9387

262826

DUF3608 superfamily
0.938

262645

Glyco_18
0.938

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger... cl00286 691.314 0 205 - 888 specific 238071
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 691.314 0 205 - 888 superfamily 260327
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 63.1714 2.11E-11 1166 - 1304 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 63.1714 2.11E-11 1166 - 1304 superfamily 238125

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 209709 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003774 GO:0005524 GO:0016459 -

GO:0003774

motor activity

Details: 
Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016459

myosin complex

Details: 
A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.
GO Category: 
CC

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