35693 SIR2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35693 chr_7 SIR2 superfamily 1481934 1483338 + SIR2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447142 Thaps35693.3, Thaps35693.1, Thaps35693.2, Thaps35693.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

30701

PRK05279
0.9365

6481

hypothetical protein
0.9301

261172

(ADH2) MDR superfamily
0.927

32468

STKc_CDC2L1
0.9263

10898

hypothetical protein
0.923

34968

Glyco_hydro_47
0.9222

4064

NADB_Rossmann superfamily
0.9179

3348

hypothetical protein
0.9154

25505

hypothetical protein
0.9147

263361

CHD
0.9106

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SIR2 superfamily SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze... - 274.175 5.65E-90 101 - 368 superfamily 260250

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21543 PHATRDRAFT_21543 208020 294757 44556 Cre12.g524650.t1.2 AT5G09230.5 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005677 GO:0006342 GO:0006355 GO:0004407 GO:0008418 GO:0008759 GO:0009017 GO:0016811 GO:0017159 GO:0018748 GO:0018749 GO:0047419 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005677

chromatin silencing complex

Details: 
Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.
GO Category: 
CC

GO:0006342

chromatin silencing

Details: 
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
GO Category: 
BP

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0004407

histone deacetylase activity

Details: 
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
GO Category: 
MF

GO:0008418

protein-N-terminal asparagine amidohydrolase activity

Details: 
Catalysis of the reaction: protein-L-asparagine + H2O = protein-L-aspartate + NH3. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.
GO Category: 
MF

GO:0008759

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity

Details: 
Catalysis of the removal of an acetyl group from the 2-N position of glucosamine in the lipid A precursor UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine.
GO Category: 
MF

GO:0009017

succinylglutamate desuccinylase activity

Details: 
Catalysis of the reaction: N-succinyl-L-glutamate + H(2)O = L-glutamate + succinate.
GO Category: 
MF

GO:0016811

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Details: 
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.
GO Category: 
MF

GO:0017159

pantetheine hydrolase activity

Details: 
Catalysis of the reaction: (R)-pantetheine + H(2)O = (R)-pantothenate + cysteamine.
GO Category: 
MF

GO:0018748

iprodione amidohydrolase activity

Details: 
Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.
GO Category: 
MF

GO:0018749

(3,5-dichlorophenylurea)acetate amidohydrolase activity

Details: 
Catalysis of the reaction: (3,5-dichlorophenylurea)acetate + OH- = 3,5-dichloroaniline + N-carboxyglycine.
GO Category: 
MF

GO:0047419

N-acetylgalactosamine-6-phosphate deacetylase activity

Details: 
Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.
GO Category: 
MF

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