23278 GrpE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23278 chr_6 GrpE 1733318 1734327 - GrpE

Synonyms

NCBI ID Ensembl Genomes exon ID
7446323 Thaps23278.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0163
 0.38

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9434

36037

Trypsin_2
0.9194

261882

Thioredoxin_like superfamily
0.9179

31829

CBS_like
0.9076

268157

DnaJ
0.9074

17214

PLN02512
0.9054

24876

hypothetical protein
0.9049

39841

ArsA_ATPase
0.9033

22547

hypothetical protein
0.8986

31751

PKCI_related
0.8984

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds... cl03075 98.3547 1.39E-25 131 - 251 specific 238252
GrpE superfamily GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds... - 98.3547 1.39E-25 131 - 251 superfamily 261574

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12188 PHATRDRAFT_12188 219337 176912 438693 Cre07.g341600.t1.2 AT5G17710.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000774 GO:0006457 GO:0042803 GO:0051087 -

GO:0000774

adenyl-nucleotide exchange factor activity

Details: 
Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.
GO Category: 
MF

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0042803

protein homodimerization activity

Details: 
Interacting selectively and non-covalently with an identical protein to form a homodimer.
GO Category: 
MF

GO:0051087

chaperone binding

Details: 
Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
GO Category: 
MF

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