38231 (PETC2) PRK13474
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
38231 chr_19a_19 (PETC2) PRK13474 185372 186110 - PRK13474
NCBI ID Ensembl Genomes exon ID
7449890 Thaps38231.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318
Normalized Mean Residue
Thaps_bicluster_0030
0.47
(bd524) NA
0.8471
(bd196) Snf7 superfamily
0.838
(bd381) NA
0.8223
trmE
0.799
hypothetical protein
0.7933
hypothetical protein
0.7895
PseudoU_synth superfamily
0.7889
RNA_pol
0.7775
(GPA1) G-alpha
0.7714
(bd1807) RRS1 superfamily
0.7625
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rieske_cytochrome_b6f Iron-sulfur protein (ISP) component of the b6f complex family, Rieske domain; The Rieske domain is... cl00938 239.189 3.73E-80 119 - 245 specific 239553
Rieske superfamily Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (... - 239.189 3.73E-80 119 - 245 superfamily 260709
PRK13474 cytochrome b6-f complex iron-sulfur subunit; Provisional - 271.525 4.80E-92 77 - 245 multi-dom 237392
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0006118 GO:0008121 GO:0016020 GO:0045285 GO:0016491 GO:0009496 -

NA

Details: 
NA
GO Category: 
NA

ubiquinol-cytochrome-c reductase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
GO Category: 
MF

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

plastoquinol--plastocyanin reductase activity

Details: 
Catalysis of the reaction: 2 H(+)[side 1] + 2 oxidized plastocyanin + plastoquinol-1 = 2 H(+)[side 2] + 2 reduced plastocyanin + plastoquinone. This reaction involves the concomitant transfer of 2 H+ ions across a membrane.
GO Category: 
MF
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