36788 PLN02438
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36788 chr_12 PLN02438 256104 258154 + PLN02438

Synonyms

NCBI ID Ensembl Genomes exon ID
7449382 Thaps36788.3, Thaps36788.2, Thaps36788.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0099
 0.44

Most Highly Correlated Transcripts

bd1670

(bd1670) SUL1
0.8581

8031

DUF1028 superfamily
0.8521

34210

PLN00158
0.8504

19793

PLN00157
0.8483

bd760

(bd760) ZnMc superfamily
0.8413

35279

(H4_2) H4
0.8349

bd1809

(bd1809) ZnMc_pappalysin_like
0.8241

6948

PLN00157
0.8177

4729

Glycos_transf_1 superfamily
0.816

22630

hypothetical protein
0.8158

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02438 inositol-3-phosphate synthase cl00554 985.379 0 6 - 508 specific 178057
NAD_binding_5 superfamily Myo-inositol-1-phosphate synthase; This is a family of myo-inositol-1-phosphate synthases. Inositol... - 985.379 0 6 - 508 superfamily 260495

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45120 PHATRDRAFT_45120 198263 318794 Not available Cre03.g180250.t1.2 AT2G22240.2 350632

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004512 GO:0006021 GO:0008654 -

GO:0004512

inositol-3-phosphate synthase activity

Details: 
Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.
GO Category: 
MF

GO:0006021

inositol biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
GO Category: 
BP

GO:0008654

phospholipid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
GO Category: 
BP

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