8031 DUF1028 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8031	chr_9	DUF1028 superfamily	552772	554025	+	DUF1028 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443553	Thaps8031.1, Thaps8031.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0131	0.35	690 1200

Most Highly Correlated Transcripts

bd1893 (bd1893) NA 0.9214	262313 Chloroa_b-bind superfamily 0.9144	bd463 (bd463) Aa_trans superfamily 0.9108	19793 PLN00157 0.8986	261826 SEC14 0.893	32723 Chloroa_b-bind 0.8913
6203 Bestrophin superfamily 0.8852	bd1645 (bd1645) tpt 0.8836	3482 hypothetical protein 0.8785	10180 hypothetical protein 0.8777

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1028 superfamily		Family of unknown function (DUF1028); Family of bacterial and archaeal proteins with unknown...	-	74.4558	7.63E-16	106 - 306	superfamily	253649

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments