36811 PTZ00018
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36811 chr_12 PTZ00018 449502 450026 - PTZ00018
NCBI ID Ensembl Genomes exon ID
7447534 Thaps36811.1, Thaps36811.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0095
Normalized Mean Residue
Thaps_bicluster_0207
0.30
(bd843) NA
0.939
(bd950) NA
0.9236
(bd463) Aa_trans superfamily
0.9213
PTZ00018
0.9094
PTZ00018
0.9081
(bd951) NA
0.9054
(bd1893) NA
0.9037
H15
0.8967
PTZ00018
0.8866
(bd760) ZnMc superfamily
0.8859
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H3 Histone H3; Histone H3. cl00074 181.877 1.31E-59 34 - 135 specific 128705
H4 superfamily Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic... - 181.877 1.31E-59 34 - 135 superfamily 260174
PTZ00018 histone H3; Provisional - 258.296 2.52E-89 1 - 136 multi-dom 185400
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0000786 GO:0003677 GO:0005634 GO:0006334 GO:0007001 -

nucleosome

Details: 
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO Category: 
CC

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

nucleosome assembly

Details: 
The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA
Log in to post comments