37450 (SPP1) PqqL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37450 chr_14 (SPP1) PqqL 519947 523948 + PqqL

Synonyms

NCBI ID Ensembl Genomes exon ID
7451244 Thaps37450.3, Thaps37450.2, Thaps37450.4, Thaps37450.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0132
 0.41

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.9134

bd258

(bd258) HU
0.8948

25177

TLC superfamily
0.882

bd1221

(bd1221) recQ_fam
0.8805

bd719

(bd719) NA
0.8679

bd208

(bd208) DUF3529
0.86

bd1380

(bd1380) ycf39
0.8503

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8431

bd1863

(bd1863) NA
0.8387

bd1304

(bd1304) Ycf4
0.8384

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 72.3432 1.82E-14 167 - 292 superfamily 250047
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 72.8938 2.13E-14 870 - 1084 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 72.8938 2.13E-14 870 - 1084 superfamily 253075
PqqL Predicted Zn-dependent peptidases [General function prediction only] - 155.31 3.34E-40 133 - 584 multi-dom 223685

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10319 PHATR_10319 277425 260856 Not available Cre17.g723250.t1.2 AT5G42390.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016491 GO:0004222 GO:0006508 -

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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