37791 LanC_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37791 chr_16a LanC_like superfamily 334155 335586 + LanC_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450011 Thaps37791.2, Thaps37791.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0101

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0175
 0.42

Most Highly Correlated Transcripts

20405

GRX_GRXh_1_2_like
0.8911

26991

GRX_GRXh_1_2_like
0.869

3661

MMCE
0.8542

37934

GRX_PICOT_like
0.8454

31169

PRX_BCP
0.8333

26769

ERG4_ERG24 superfamily
0.8265

9776

hypothetical protein
0.8188

264157

CBS_pair superfamily
0.8185

268625

v-snare protein, Vti1 C-terminal half-like protein
0.8173

21255

SYLF
0.8171

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LanC_like superfamily LanC-like proteins. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthionine is a... - 232.951 5.19E-72 72 - 448 superfamily 262377

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 208721 Not available Cre03.g151250.t1.1 AT1G52920.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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