38191 (HSP60) groEL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38191 chr_18 (HSP60) groEL 318941 320837 - groEL

Synonyms

NCBI ID Ensembl Genomes exon ID
7442965 Thaps38191.1, Thaps38191.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0204

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0140
 0.29

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9662

10366

hypothetical protein
0.8688

25797

(Tp_bHLH3) regulator [Rayko]
0.8563

8349

NADB_Rossmann superfamily
0.8435

9247

hypothetical protein
0.8396

3154

(Tp_HSF_1b) HSF_DNA-bind
0.8334

262610

ADPRase_NUDT5
0.8205

22766

PRK05218
0.8162

22213

(PFK2) PFK superfamily
0.8152

bd1662

(bd1662) TIGR00367
0.8116

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They... cl02777 882.179 0 48 - 571 specific 239460
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 882.179 0 48 - 571 superfamily 261443
groEL chaperonin GroEL; Reviewed - 751.165 0 46 - 571 multi-dom 237231

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24820 PHATRDRAFT_24820 265209 317826 459873 Cre06.g309100.t1.2 AT3G13860.1 549587

KEGG

KEGG description KEGG Pathway
RNA degradation map03018

GO Terms

GO:0005515 GO:0005524 GO:0044267 GO:0003763 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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