38240 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38240 chr_19a_19 HA 53778 55184 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442629 Thaps38240.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0030

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9466

4108

hypothetical protein
0.8954

bd624

(bd624) Glyco_transf_34 superfamily
0.8947

bd718

(bd718) PRK10387
0.8864

270251

(NTT4) hypothetical protein
0.8841

6595

hypothetical protein
0.877

bd1949

(bd1949) NA
0.8759

262762

BET4
0.8755

9373

hypothetical protein
0.8709

bd1192

(bd1192) Acyl_ACP_Desat
0.8703

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.9377 3.40E-12 331 - 391 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.9377 3.40E-12 331 - 391 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.9377 3.40E-12 331 - 391 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.9377 3.40E-12 331 - 391 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25786 Not available 242105 187185 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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