38767 Peptidase_C1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38767 chr_22 Peptidase_C1 superfamily 708518 708778 + Peptidase_C1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443924 Thaps38767.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0108

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

264846

Peptidase_C1A
0.9616

bd1808

(bd1808) NA
0.8866

bd1793

(bd1793) NA
0.8723

bd410

(bd410) HNHc
0.856

bd1841

(bd1841) CAP10 superfamily
0.8382

270222

0.8342

bd1845

(bd1845) NA
0.8331

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8307

11300

hypothetical protein
0.8201

24659

DnaQ_like_exo superfamily
0.8195

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 69.1898 4.15E-16 1 - 57 superfamily 260335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

Add comment

Log in to post comments