39110 Fer4_NifH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39110 chr_1 Fer4_NifH superfamily 1285636 1287685 + Fer4_NifH superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451442 Thaps39110.1, Thaps39110.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0240

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

9345

hypothetical protein
0.8879

bd692

(bd692) NA
0.868

263880

PRK12267
0.8235

261823

FIG superfamily
0.8096

4372

hypothetical protein
0.8068

4330

DUF2256
0.8019

24746

hypothetical protein
0.7973

36641

Aldolase_Class_I superfamily
0.7955

354

PTZ00424
0.7943

22508

hypothetical protein
0.794

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 371.461 1.54E-127 3 - 325 superfamily 266552
ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport... - 286.529 1.74E-94 4 - 328 multi-dom 224617

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12878 PHATRDRAFT_12878 179311 208984 71714 Not available Not available 315055

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments