39187 (TCP1) TCP1_gamma
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39187 chr_1 (TCP1) TCP1_gamma 1890028 1893506 - TCP1_gamma

Synonyms

NCBI ID Ensembl Genomes exon ID
7449784 Thaps39187.2, Thaps39187.4, Thaps39187.3, Thaps39187.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0287

Most Highly Correlated Transcripts

31929

(GGPS5) Trans_IPPS_HT
0.9082

105

PTZ00248
0.8909

38707

Aldolase_Class_I superfamily
0.8901

7714

DUF1014
0.8895

268443

SAICAR_synt_Sc
0.8874

32108

hypothetical protein
0.8822

30701

PRK05279
0.8788

268062

PRK14293
0.8734

24746

hypothetical protein
0.8716

7151

hypothetical protein
0.868

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in... cl02777 836.179 0 6 - 552 specific 239453
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 836.179 0 6 - 552 superfamily 261443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21789 PHATRDRAFT_21789 200973 318551 Not available Cre10.g443250.t1.2 AT5G26360.1 346179

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

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