39696 PTZ00295
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39696 chr_2 PTZ00295 2166559 2169090 + PTZ00295

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0116
 0.38

Most Highly Correlated Transcripts

270222

0.9389

26136

MRS6 superfamily
0.9022

10567

(GFA_2) PTZ00295
0.8856

bd1662

(bd1662) TIGR00367
0.8747

8686

hypothetical protein
0.8528

4767

hypothetical protein
0.8523

1820

SET
0.8482

bd911

(bd911) GH18_chitinase-like superfamily
0.8403

23556

hypothetical protein
0.8381

11268

hypothetical protein
0.8351

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of... cl00319 283.184 6.50E-91 24 - 237 specific 238366
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 283.184 6.50E-91 24 - 237 superfamily 260351
SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 187.855 6.41E-56 479 - 638 specific 240142
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 127.999 1.27E-34 311 - 440 superfamily 260399
SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 127.999 1.27E-34 311 - 440 specific 240141
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 127.999 1.27E-34 311 - 440 superfamily 260399
PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional - 766.491 0 25 - 640 multi-dom 240349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0005529 GO:0005975 GO:0004360 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0005529

NA

Details: 
NA
GO Category: 
NA

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0004360

glutamine-fructose-6-phosphate transaminase (isomerizing) activity

Details: 
Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.
GO Category: 
MF

Add comment

Log in to post comments