40522 (VAT1) V-ATPase_V1_B
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40522 chr_4 (VAT1) V-ATPase_V1_B 2194864 2196841 - V-ATPase_V1_B
NCBI ID Ensembl Genomes exon ID
7451394 Thaps40522.1, Thaps40522.3, Thaps40522.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0078
Normalized Mean Residue
Thaps_bicluster_0271
0.35
hypothetical protein
0.914
hypothetical protein
0.9067
hypothetical protein
0.9054
VATPase_H superfamily
0.9025
hypothetical protein
0.8986
ATP-synt_F superfamily
0.8976
hypothetical protein
0.8936
Peptidase_C14
0.8891
hypothetical protein
0.8862
Rab
0.8792
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build... cl17233 576.538 0 104 - 386 specific 238555
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 576.538 0 104 - 386 superfamily 266574
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 81.1646 1.98E-18 403 - 497 superfamily 249758
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 81.1646 1.98E-18 403 - 497 superfamily 249758
V-ATPase_V1_B V-type (H+)-ATPase V1, B subunit; This models eukaryotic vacuolar (H+)-ATPase that is responsible... - 930.672 0 32 - 491 multi-dom 233244
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24978 PHATRDRAFT_24978 203765 44144 442547 Cre02.g076350.t1.2 AT4G38510.5 502439
KEGG description KEGG Pathway
Phagosome map04145
GO:0005524 GO:0015986 GO:0016469 GO:0046933 GO:0046961 GO:0006754 GO:0005737 GO:0008553 GO:0015988 GO:0003936 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATP synthesis coupled proton transport

Details: 
The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO Category: 
BP

proton-transporting two-sector ATPase complex

Details: 
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.
GO Category: 
CC

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

ATP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
BP

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

hydrogen-exporting ATPase activity, phosphorylative mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
GO Category: 
MF

energy coupled proton transmembrane transport, against electrochemical gradient

Details: 
The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA
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