40704 WD40
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40704 chr_5 WD40 764678 767619 - WD40

Synonyms

NCBI ID Ensembl Genomes exon ID
7446433 Thaps40704.4, Thaps40704.2, Thaps40704.3, Thaps40704.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0194

Most Highly Correlated Transcripts

19059

SynMuv_product superfamily
0.9423

33895

GlcD
0.9306

30701

PRK05279
0.9273

36007

Aldolase_II superfamily
0.9201

37497

cysE
0.9175

38736

S_TKc
0.9175

263397

(PGAM4) HP_PGM_like
0.9165

268896

DnaQ_like_exo superfamily
0.9147

444

zinc_ribbon_6
0.9136

22507

hypothetical protein
0.913

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 161.349 5.34E-44 545 - 826 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 161.349 5.34E-44 545 - 826 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 136.757 3.08E-34 498 - 826 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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