40767 DUF3523
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40767 chr_5 DUF3523 1357790 1360146 - DUF3523

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0350

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0074
 0.37

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9579

263917

0.7143

263864

0.6883

262692

0.6599

bd1079

(bd1079) NA
0.6471

bd1216

(bd1216) Delta6-FADS-like
0.6414

plastidpH

0.6359

bd1069

(bd1069) NA
0.6247

ThpsCt016

(trnS(uga))
0.6218

bd517

(bd517) NA
0.6166

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 68.3267 2.08E-13 408 - 540 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 68.3267 2.08E-13 408 - 540 superfamily 267297
DUF3523 Domain of unknown function (DUF3523); This presumed domain is functionally uncharacterized. This... - 98.3127 1.01E-22 127 - 343 multi-dom 256812

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 507459

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 GO:0016817 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016817

hydrolase activity, acting on acid anhydrides

Details: 
Catalysis of the hydrolysis of any acid anhydride.
GO Category: 
MF

Add comment

Log in to post comments