ThpsCt016 (trnS(uga)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt016	chloroplast	(trnS(uga))	56461	56548	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524842	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0090

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0027	0.38

Most Highly Correlated Transcripts

bd2028 (bd2028) NA 0.9305	bd1339 (bd1339) psaD 0.9255	bd1403 (bd1403) NA 0.922	37539 cpn10 0.9196	23329 groEL 0.9177	bd1380 (bd1380) ycf39 0.9146
bd208 (bd208) DUF3529 0.8991	bd1652 (bd1652) ABC_ATPase superfamily 0.8988	bd211 (bd211) Maf_Ham1 superfamily 0.8911	bd1863 (bd1863) NA 0.8887

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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