40826 ER_lumen_recept
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40826 chr_5 ER_lumen_recept 1857844 1859474 - ER_lumen_recept

Synonyms

NCBI ID Ensembl Genomes exon ID
7444865 Thaps40826.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0206

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0200
 0.21

Most Highly Correlated Transcripts

bd463

(bd463) Aa_trans superfamily
0.9545

bd1893

(bd1893) NA
0.9526

bd1645

(bd1645) tpt
0.9311

31829

CBS_like
0.9176

bd1306

(bd1306) NA
0.9141

35684

dak_ATP
0.9102

262977

NA
0.9093

33035

YGGT
0.9004

bd1078

(bd1078) NA
0.8996

22248

PLN00162
0.8968

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ER_lumen_recept ER lumen protein retaining receptor; ER lumen protein retaining receptor. cl02155 111.497 3.62E-30 62 - 223 specific 144416
ER_lumen_recept superfamily ER lumen protein retaining receptor; ER lumen protein retaining receptor. - 111.497 3.62E-30 62 - 223 superfamily 242908

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5104 PHATRDRAFT_5104 175707 64231 Not available Not available Not available 502839

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004872 GO:0015031 GO:0016021 -

GO:0004872

receptor activity

Details: 
Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
GO Category: 
MF

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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