41068 (ACT2) Actin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41068 chr_6 (ACT2) Actin 1135226 1136929 + Actin

Synonyms

NCBI ID Ensembl Genomes exon ID
7442378 Thaps41068.2, Thaps41068.3, Thaps41068.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0410

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.9114

bd1934

(bd1934) NA
0.9023

12836

EEP superfamily
0.8917

9454

Transglut_core2
0.8839

bd1801

(bd1801) NA
0.8652

22284

Nudix_Hydrolase superfamily
0.8615

bd738

(bd738) NA
0.8578

21751

DUF1336 superfamily
0.8569

2328

hypothetical protein
0.8543

2124

Pan_kinase superfamily
0.851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NBD_sugar-kinase_HSP70_actin superfamily Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... - 174.187 2.10E-49 6 - 458 superfamily 266502
Actin Actin; Actin. - 236.735 4.75E-73 5 - 458 multi-dom 249516

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20837 PHATRDRAFT_20837 188033 188258 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

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