413 HIBADH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
413 chr_4 HIBADH 1833553 1834638 + HIBADH

Synonyms

NCBI ID Ensembl Genomes exon ID
7451945 Thaps413.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0036

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

bd885

(bd885) NA
0.881

bd884

(bd884) NA
0.8638

31011

Mito_carr
0.8397

bd694

(bd694) NA
0.8329

270222

0.8315

bd693

(bd693) HSF_DNA-bind superfamily
0.8277

37058

TRX_family
0.7971

1740

PDZ superfamily
0.7884

bd1841

(bd1841) CAP10 superfamily
0.7882

26769

ERG4_ERG24 superfamily
0.7851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_11 superfamily NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; 3-Hydroxyisobutyrate is a central... - 130.289 8.33E-37 221 - 351 superfamily 258970
NAD_binding_11 superfamily NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; 3-Hydroxyisobutyrate is a central... - 130.289 8.33E-37 221 - 351 superfamily 258970
NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of 6-... cl19126 119.865 2.38E-32 45 - 220 specific 251959
F420_oxidored superfamily NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent. - 119.865 2.38E-32 45 - 220 superfamily 267479
HIBADH 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes... - 243.552 6.47E-78 49 - 352 multi-dom 130753

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45141 PHATRDRAFT_45141 Not available Not available 434867 Cre14.g630859.t1.1 AT4G20930.1 284006

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006573 GO:0008442 GO:0005975 GO:0016614 GO:0004616 GO:0006098 -

GO:0006573

valine metabolic process

Details: 
The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.
GO Category: 
BP

GO:0008442

3-hydroxyisobutyrate dehydrogenase activity

Details: 
Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0016614

oxidoreductase activity, acting on CH-OH group of donors

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO Category: 
MF

GO:0004616

phosphogluconate dehydrogenase (decarboxylating) activity

Details: 
Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.
GO Category: 
MF

GO:0006098

pentose-phosphate shunt

Details: 
The process in which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.
GO Category: 
BP

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