41637 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41637 chr_8 Patatin_and_cPLA2 superfamily 1079100 1081444 + Patatin_and_cPLA2 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0449

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0113
 0.35

Most Highly Correlated Transcripts

269100

S_TKc
0.9195

23952

hypothetical protein
0.9184

38726

hypothetical protein
0.9016

10873

NA
0.8953

35410

Transglut_core
0.8944

263963

Adaptin_N
0.8917

21274

hypothetical protein
0.8915

22666

hypothetical protein
0.8907

8518

hypothetical protein
0.8895

12500

SNF2_N
0.8891

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 357.147 1.43E-119 156 - 452 superfamily 264349
RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] - 113.291 2.94E-28 223 - 459 multi-dom 224666

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_1971 PHATRDRAFT_1971 178296 327636 450947 Cre17.g699100.t1.1 AT5G04040.1 299378

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0045735 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0045735

nutrient reservoir activity

Details: 
Functions in the storage of nutritious substrates.
GO Category: 
MF

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