41754 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41754 chr_9 PKc_like superfamily 993211 996388 + PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450986 Thaps41754.1, Thaps41754.3, Thaps41754.4, Thaps41754.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0366

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0068
 0.42

Most Highly Correlated Transcripts

4108

hypothetical protein
0.8142

264598

AAA
0.7636

260891

WD40
0.7442

24525

hypothetical protein
0.7314

36525

PRK09427
0.7288

268908

Trans_IPPS_HH
0.722

bd686

(bd686) Glyco_transf_22 superfamily
0.7152

36971

PRK05704
0.7148

269459

hypothetical protein
0.7136

37497

cysE
0.7119

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 64.2694 5.14E-12 336 - 456 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 64.2694 5.14E-12 336 - 456 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 64.2694 5.14E-12 336 - 456 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 64.2694 5.14E-12 336 - 456 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 337.211 1.51E-107 626 - 921 superfamily 263920
PTZ00263 protein kinase A catalytic subunit; Provisional - 288.64 7.02E-89 610 - 949 multi-dom 140289

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004867 GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0003676 GO:0004522 GO:0004674 -

GO:0004867

serine-type endopeptidase inhibitor activity

Details: 
Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
GO Category: 
MF

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0004522

pancreatic ribonuclease activity

Details: 
Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

Add comment

Log in to post comments