41898 (HSP70_2) HYOU1-like_NBDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
41898	chr_10	(HSP70_2) HYOU1-like_NBD	938872	941780	+	HYOU1-like_NBD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450765	Thaps41898.1, Thaps41898.3, Thaps41898.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0059

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0156	0.33	0.066 0.023

Most Highly Correlated Transcripts

40348 (cdc48) SpoVK 0.8998	21043 hypothetical protein 0.8718	1888 hypothetical protein 0.8634	40725 (cdc48-2) CDC48 0.8535	33008 PLN02338 0.8472	268061 hypothetical protein 0.8442
261407 NAD_binding_8 superfamily 0.8433	2611 hypothetical protein 0.8391	bd911 (bd911) GH18_chitinase-like superfamily 0.8389	268271 PRK10867 0.8343

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HYOU1-like_NBD		Nucleotide-binding domain of human HYOU1 and similar proteins; This subgroup includes human HYOU1 (...	cl17037	542.156	0	25 - 418	specific	212672
NBD_sugar-kinase_HSP70_actin superfamily		Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes...	-	542.156	0	25 - 418	superfamily	266502
HSP70		Hsp70 protein; Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves...	-	291.829	3.88E-87	24 - 741	multi-dom	249507

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_55122	PHATRDRAFT_55122	210974	248917	Not available	Cre10.g439900.t1.2	AT4G16660.1	Not available

KEGG

KEGG description	KEGG Pathway
Protein processing in endoplasmic reticulum	map04141

GO Terms

GO:0005524 -

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