4202 (Tp_bHLH8_PAS) pas-domain protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4202 chr_4 (Tp_bHLH8_PAS) pas-domain protein 445546 448282 - pas-domain protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7442095 Thaps4202.2, Thaps4202.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0065
 0.48

Most Highly Correlated Transcripts

bd1841

(bd1841) CAP10 superfamily
0.9434

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9078

bd410

(bd410) HNHc
0.8879

bd1756

(bd1756) NA
0.8172

bd884

(bd884) NA
0.8121

bd1839

(bd1839) NA
0.8117

bd1954

(bd1954) NA
0.8083

bd1840

(bd1840) NA
0.7981

bd885

(bd885) NA
0.798

bd1808

(bd1808) NA
0.7831

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004871 GO:0007165 GO:0004308 -

GO:0004871

signal transducer activity

Details: 
Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO Category: 
MF

GO:0007165

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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