42594 Ribosomal_P0_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42594 chr_16a Ribosomal_P0_like 385503 386834 - Ribosomal_P0_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7442546 Thaps42594.3, Thaps42594.1, Thaps42594.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0101
 0.32

Most Highly Correlated Transcripts

bd1667

(bd1667) Mpp10
0.959

bd1709

(bd1709) NA
0.949

24849

(Tp_CCCH8) DnaQ_like_exo superfamily
0.948

22203

(Tp_CCHH28) zf-C2H2_2
0.9405

269776

Ribosomal_L1
0.9376

bd96

(bd96) eIF-3_zeta
0.9359

34826

zf-C2H2_jaz superfamily
0.9357

268145

PLN00040
0.9244

20658

Nop53
0.9243

27873

PLN02274
0.9215

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic... cl00376 194.334 1.68E-62 21 - 185 specific 240222
Ribosomal_L10_P0 superfamily Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in... - 194.334 1.68E-62 21 - 185 superfamily 260390

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12144 PHATRDRAFT_12144 224041 256694 445578 Cre06.g261700.t1.2 AT1G25260.1 342006

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005622 GO:0042254 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0042254

ribosome biogenesis

Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
GO Category: 
BP

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