4424 LabA_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4424 chr_4 LabA_like 982758 985453 - LabA_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7447938 Thaps4424.2, Thaps4424.3, Thaps4424.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.9509

bd1403

(bd1403) NA
0.9343

bd890

(bd890) NA
0.9274

bd208

(bd208) DUF3529
0.9219

bd211

(bd211) Maf_Ham1 superfamily
0.9197

bd1306

(bd1306) NA
0.9194

bd843

(bd843) NA
0.9182

bd1380

(bd1380) ycf39
0.918

bd668

(bd668) NA
0.9093

bd950

(bd950) NA
0.8989

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LabA_like LabA_like proteins; A well conserved group of domains found in all three kingdoms of life, with no... cl10034 87.1192 1.40E-19 274 - 451 specific 199895
LabA_like/DUF88 superfamily LabA_like proteins; The LabA-like superfamily is composed of a well conserved group of bacterial... - 87.1192 1.40E-19 274 - 451 superfamily 263953

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49641 PHATRDRAFT_49641 237096 149010 103782 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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