4866 PROCN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4866 chr_4 PROCN 2116857 2122394 - PROCN

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0057

Most Highly Correlated Transcripts

7336

hypothetical protein
1

2958

PROCN
0.9579

33225

MYSc
0.9331

262826

DUF3608 superfamily
0.9285

268454

CAP_ED
0.9274

261059

hypothetical protein
0.9271

5776

PROCN superfamily
0.9253

262171

CAP_ED
0.9251

8819

MPP_superfamily superfamily
0.9234

262645

Glyco_18
0.9214

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PROCN superfamily PROCN (NUC071) domain; The PROCN domain is the central domain in pre-mRNA splicing factors of PRO8... - 543.556 7.51E-179 702 - 1079 superfamily 116688
PROCN superfamily PROCN (NUC071) domain; The PROCN domain is the central domain in pre-mRNA splicing factors of PRO8... - 543.556 7.51E-179 702 - 1079 superfamily 116688
PRO8NT superfamily PRO8NT (NUC069), PrP8 N-terminal domain; The PRO8NT domain is found at the N-terminus of pre-mRNA... - 279.203 2.65E-86 300 - 436 superfamily 149261
PRO8NT superfamily PRO8NT (NUC069), PrP8 N-terminal domain; The PRO8NT domain is found at the N-terminus of pre-mRNA... - 279.203 2.65E-86 300 - 436 superfamily 149261
MPN superfamily Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains... - 196.309 1.04E-55 1440 - 1543 superfamily 265414
RNase_H_like superfamily Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of... - 94.3356 7.23E-21 1346 - 1392 superfamily 265450

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 276309 Not available 450596 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments