4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4883	chr_4	(Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type	2180578	2181367	+	fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452241	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0223	0.11	0.0000034 0.000084

Most Highly Correlated Transcripts

4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 1	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9933	bd218 (bd218) Chloroa_b-bind superfamily 0.9928	33131 Chloroa_b-bind 0.9898	34276 Chloroa_b-bind 0.9898	36081 Chloroa_b-bind 0.9877
bd1820 (bd1820) Fasciclin 0.9865	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9858	23808 hypothetical protein 0.9836	33606 Chloroa_b-bind superfamily 0.9817

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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