33131 Chloroa_b-bindThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33131	chr_3	Chloroa_b-bind	1871607	1872251	+	Chloroa_b-bind

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps33131.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0223	0.11	0.0000034 0.000084

Most Highly Correlated Transcripts

3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 1	bd218 (bd218) Chloroa_b-bind superfamily 0.9967	4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 0.9898	34276 Chloroa_b-bind 0.987	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9869	36081 Chloroa_b-bind 0.9852
bd1820 (bd1820) Fasciclin 0.9851	38122 Chloroa_b-bind superfamily 0.984	31749 Chloroa_b-bind superfamily 0.9807	270222 0.9802

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	97.7625	1.34E-25	69 - 197	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	97.7625	1.34E-25	69 - 197	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	136879	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0009765 GO:0016020 -

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