5108 DUF3727
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5108 chr_5 DUF3727 382219 383194 - DUF3727

Synonyms

NCBI ID Ensembl Genomes exon ID
7449673 Thaps5108.2, Thaps5108.1, Thaps5108.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0296

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0040
 0.39

Most Highly Correlated Transcripts

bd1757

(bd1757) NA
0.9021

bd208

(bd208) DUF3529
0.8786

bd211

(bd211) Maf_Ham1 superfamily
0.8732

bd1154

(bd1154) tpt
0.8715

16912

IMPase
0.8649

bd1652

(bd1652) ABC_ATPase superfamily
0.8492

bd1078

(bd1078) NA
0.8481

bd1306

(bd1306) NA
0.846

bd1380

(bd1380) ycf39
0.8429

bd1893

(bd1893) NA
0.8413

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3727 superfamily Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, and... - 71.4756 3.36E-16 161 - 260 superfamily 257107
DUF3727 superfamily Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, and... - 71.4756 3.36E-16 161 - 260 superfamily 257107

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43285 PHATRDRAFT_43285 191385 33619 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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