5236 DUF819 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5236	chr_5	DUF819 superfamily	682512	683963	-	DUF819 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446416	Thaps5236.4, Thaps5236.3, Thaps5236.2, Thaps5236.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0230

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0195	0.28	0.52 1.7

Most Highly Correlated Transcripts

269917 TrmA 0.8939	36650 hypothetical protein 0.8907	21971 hypothetical protein 0.887	22356 PseudoU_synth_ScPUS7 0.8684	36845 (RPA2_1) RpoB 0.8653	23246 hypothetical protein 0.859
10278 YihA_EngB 0.857	21545 hypothetical protein 0.8565	2157 D123 superfamily 0.8536	16287 Pkinase 0.8527

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF819 superfamily		Protein of unknown function (DUF819); This family contains proteins of unknown function from...	-	196.457	2.89E-58	28 - 386	superfamily	242981

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20788	PHATRDRAFT_10800	PHATRDRAFT_10800	158448	326522	110140	Cre02.g077150.t1.1	AT5G24000.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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