5240 ALAD_PBGS_aspartate_rich
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5240 chr_5 ALAD_PBGS_aspartate_rich 692051 693458 + ALAD_PBGS_aspartate_rich

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps5240.2, Thaps5240.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0208
 0.25

Most Highly Correlated Transcripts

270280

hypothetical protein
0.9987

2356

hypothetical protein
0.9663

8063

SDR_c
0.9555

719

PLN02433
0.9535

4718

SDR_a5
0.9533

1989

FKBP_C
0.9526

270222

0.9518

3327

hypothetical protein
0.9503

261232

URO-D
0.9503

6139

Chloroa_b-bind superfamily
0.9497

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD... cl00338 602.625 0 78 - 395 specific 240127
ALAD_PBGS superfamily Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD... - 602.625 0 78 - 395 superfamily 260366

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41746 PHATRDRAFT_41746 204524 302269 448062 Cre02.g091050.t1.2 AT1G69740.2 285964

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004655 GO:0006783 -

GO:0004655

porphobilinogen synthase activity

Details: 
Catalysis of the reaction: 2 5-aminolevulinate = 2 H(2)O + H(+) + porphobilinogen.
GO Category: 
MF

GO:0006783

heme biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.
GO Category: 
BP

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