6139 Chloroa_b-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6139 chr_6 Chloroa_b-bind superfamily 805432 806281 - Chloroa_b-bind superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443608 Thaps6139.1, Thaps6139.3, Thaps6139.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0102
 0.20

Most Highly Correlated Transcripts

3327

hypothetical protein
0.9554

270092

Chloroa_b-bind superfamily
0.9523

7916

(FCP_2) Chloroa_b-bind superfamily
0.9499

5240

ALAD_PBGS_aspartate_rich
0.9497

2341

(Lhcr12) fucoxanthin chlorophyll a/c protein
0.9489

31983

Chloroa_b-bind superfamily
0.9469

1989

FKBP_C
0.944

2356

hypothetical protein
0.9425

270233

hypothetical protein
0.94

1049

MviM
0.9357

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 131.789 7.97E-38 1 - 213 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271208 246666 260243 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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