5265 VEFS-Box superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5265 chr_5 VEFS-Box superfamily 757524 759321 - VEFS-Box superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449578 Thaps5265.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0049

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0006
 0.41

Most Highly Correlated Transcripts

bd211

(bd211) Maf_Ham1 superfamily
0.918

bd1652

(bd1652) ABC_ATPase superfamily
0.9127

bd1380

(bd1380) ycf39
0.8876

bd1403

(bd1403) NA
0.8659

6028

NA
0.8614

bd1214

(bd1214) KISc_C_terminal
0.8572

11397

hypothetical protein
0.853

bd1306

(bd1306) NA
0.8522

bd208

(bd208) DUF3529
0.8488

bd951

(bd951) NA
0.8483

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VEFS-Box superfamily VEFS-Box of polycomb protein; The VEFS-Box (VRN2-EMF2-FIS2-Su(z)12) box is the C-terminal region of... - 100.93 6.08E-25 477 - 594 superfamily 204299

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT2G35670.1 324933

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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