5284 LbH_gamma_CA_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5284 chr_5 LbH_gamma_CA_like 799305 800106 + LbH_gamma_CA_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7449589 Thaps5284.2, Thaps5284.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0444

Most Highly Correlated Transcripts

9036

hypothetical protein
0.9143

21220

KU superfamily
0.8986

12836

EEP superfamily
0.8769

262559

(RAB11a) Rab11_like
0.8717

4501

EMP24_GP25L
0.8707

264271

PKc_like superfamily
0.8702

261864

FSH1 superfamily
0.8686

38111

Mito_carr
0.8685

13448

Sec1
0.8677

2494

UAA
0.8672

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA),... cl00160 192.627 3.79E-62 71 - 184 specific 100051
LbetaH superfamily Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each... - 192.627 3.79E-62 71 - 184 superfamily 260227
PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction... - 177.01 9.54E-56 71 - 190 multi-dom 223735

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 219200 74995 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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